TAP mTERF in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

mTERF

(Domain names are clickable)



List of proteins (31)

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c0_seq1_3[1273 - 2619] len=2861 path=[1:0-1009 1011:1010-1271 1273:1272-1275 1277:1276-1375 1377:1376-1559 1561:1560-1784 1786:1785-1997 7371:1998-2000 2002:2001-2110 2112:2111-2711 2713:2712-2712 2714:2713-2860]
c0_seq4_2[160 - 1260] len=1502 path=[6353:0-200 1561:201-425 1786:426-638 7371:639-641 2002:642-751 2112:752-1352 2713:1353-1353 2714:1354-1501]
c0_seq6_2[1 - 873] len=1115 path=[7245:0-38 1786:39-251 7371:252-254 2002:255-364 2112:365-965 2713:966-966 2714:967-1114]
c0_seq1_9_rccomp10301_c0_seq1_9 [1768 - 302] (REVERSE SENSE) len=2195 path=[1:0-380 382:381-562 564:563-591 593:592-729 731:730-879 881:880-924 926:925-946 948:947-1590 1592:1591-1654 5313:1655-1875 6649:1876-1885 1666:1886-1888 1669:1889-1951 1732:1952-1971 1752:1972-2194]
c0_seq2_10_rccomp10301_c0_seq2_10 [1765 - 299] (REVERSE SENSE) len=2192 path=[4281:0-377 382:378-559 564:560-588 593:589-726 731:727-876 881:877-921 926:922-943 948:944-1587 1592:1588-1651 5313:1652-1872 6649:1873-1882 1666:1883-1885 1669:1886-1948 1732:1949-1968 1752:1969-2191]
c0_seq3_9_rccomp10301_c0_seq3_9 [1657 - 302] (REVERSE SENSE) len=1974 path=[1:0-380 382:381-562 564:563-591 593:592-729 731:730-879 881:880-924 926:925-946 948:947-1590 1592:1591-1654 6649:1655-1664 1666:1665-1667 1669:1668-1730 1732:1731-1750 1752:1751-1973]
c0_seq4_10_rccomp10301_c0_seq4_10 [1654 - 299] (REVERSE SENSE) len=1971 path=[4281:0-377 382:378-559 564:560-588 593:589-726 731:727-876 881:877-921 926:922-943 948:944-1587 1592:1588-1651 6649:1652-1661 1666:1662-1664 1669:1665-1727 1732:1728-1747 1752:1748-1970]
c0_seq5_9_rccomp10301_c0_seq5_9 [1660 - 302] (REVERSE SENSE) len=1868 path=[1:0-380 382:381-562 564:563-591 593:592-729 731:730-879 881:880-924 926:925-946 948:947-1590 5800:1591-1867]
c0_seq6_10_rccomp10301_c0_seq6_10 [1657 - 299] (REVERSE SENSE) len=1865 path=[4281:0-377 382:378-559 564:560-588 593:589-726 731:727-876 881:877-921 926:922-943 948:944-1587 5800:1588-1864]
c0_seq1_3[734 - 2644] len=2900 path=[1:0-64 66:65-69 71:70-509 511:510-645 5899:646-730 647:731-1404 1321:1405-1551 6139:1552-1555 1468:1556-1914 1827:1915-2349 2262:2350-2899]
c0_seq2_2[169 - 2559] len=2815 path=[1:0-64 66:65-69 71:70-509 511:510-645 647:646-1319 1321:1320-1466 6139:1467-1470 1468:1471-1829 1827:1830-2264 2262:2265-2814]
c0_seq3_3[734 - 1939] len=1994 path=[1:0-64 66:65-69 71:70-509 511:510-645 5899:646-730 647:731-1404 1321:1405-1551 6139:1552-1555 1468:1556-1914 5823:1915-1993]
c0_seq4_2[169 - 1854] len=1909 path=[1:0-64 66:65-69 71:70-509 511:510-645 647:646-1319 1321:1320-1466 6139:1467-1470 1468:1471-1829 5823:1830-1908]
c0_seq1_3_rccomp121023_c0_seq1_3 [980 - 339] (REVERSE SENSE) len=981 path=[959:0-980]
c0_seq1_1[3 - 1298] len=1908 path=[1:0-1907]
c0_seq1_1[433 - 2010] len=3427 path=[1:0-3426]
c0_seq1_6_rccomp2853_c0_seq1_6 [2541 - 1198] (REVERSE SENSE) len=2541 path=[1:0-459 3586:460-1195 461:1196-2540]
c0_seq2_5_rccomp2853_c0_seq2_5 [1805 - 399] (REVERSE SENSE) len=1805 path=[1:0-459 461:460-1804]
c0_seq1_5[718 - 1803] len=2241 path=[2218:0-745 4470:746-746 2964:747-2240]
c0_seq1_4[2 - 769] len=769 path=[747:0-768]
c1_seq1_3_rccomp514_c1_seq1_3 [654 - 160] (REVERSE SENSE) len=654 path=[1493:0-653]
c0_seq1_2[3 - 1385] len=1588 path=[1566:0-635 2202:636-1359 2926:1360-1587]
c0_seq1_11_rccomp6370_c0_seq1_11 [2351 - 705] (REVERSE SENSE) len=2489 path=[1:0-2257 2259:2258-2281 6765:2282-2448 6932:2449-2468 7380:2469-2488]
c0_seq1_6[1285 - 2337] len=2862 path=[1:0-392 5221:393-506 394:507-671 6072:672-672 559:673-1098 5599:1099-1316 985:1317-2378 2047:2379-2861]
c0_seq2_5[1171 - 2223] len=2748 path=[1:0-392 394:393-557 6072:558-558 559:559-984 5599:985-1202 985:1203-2264 2047:2265-2747]
c0_seq3_5[665 - 2119] len=2644 path=[1:0-392 5221:393-506 394:507-671 6072:672-672 559:673-1098 985:1099-2160 2047:2161-2643]
c0_seq4_4[551 - 2005] len=2530 path=[1:0-392 394:393-557 6072:558-558 559:559-984 985:985-2046 2047:2047-2529]
c0_seq1_6[1662 - 2855] len=3089 path=[2920:0-311 3232:312-672 6420:673-819 3593:820-3088]
c0_seq2_5[1515 - 2708] len=2942 path=[2920:0-311 3232:312-672 3593:673-2941]
c0_seq1_15_rccomp9844_c0_seq1_15 [3381 - 2062] (REVERSE SENSE) len=3428 path=[3224:0-457 3682:458-554 3779:555-1674 6865:1675-1856 4899:1857-3427]
c0_seq2_15_rccomp9844_c0_seq2_15 [3199 - 1880] (REVERSE SENSE) len=3246 path=[3224:0-457 3682:458-554 3779:555-1674 4899:1675-3245]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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